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Dimension of a exported data array

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I have two model, and I need to graph with matlab the difference. I plot with 1D graph a first model, and export the graph; then i plot with 1D graph the second model, and export the graph. My problem is : the first exported data array has dimension 2x666, the second has dimension 2x487. How I make matching the array dimension? There are a hidden option in 1 D graph?
Thank you

More info : I do this : I copy a .mph file, delete the object of the difference between the two model, and then plot and export. I don't understand why this operation change the array columns from 666 to 487

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